PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87501.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 232aa MW: 24948 Da PI: 7.9552

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0015	95	117	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cgk F + L H ++H RWV87501.1 95 HRCSVCGKAFGSYQALGGHKSSH 117 79********9999999998887 PP
2	zf-C2H2	11.7	0.00083	145	167	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k+F++ L H r+H RWV87501.1 145 HRCSVCLKTFPSGQALGGHKRRH 167 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MDLDSARNYP MAVQTLETTV PTAIPLLSAE TSDEELPHIE GWAKRKRSKR FFDHPPTEEE 60 YLAFCLVMLA RGGGSGTHRL PMLAPNSAPA VKLEHRCSVC GKAFGSYQAL GGHKSSHRKP 120 GSGVEEPSAS GSSTASAAFV GGRVHRCSVC LKTFPSGQAL GGHKRRHYDG SLGSGSLEGA 180 SSSHRAFDLN VPTSPDSEFD NVKRWAAAMK EEEEEEVQSS LAFKKPRLLV PA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67450.1	2e-40	C2H2 family protein