PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87557.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 249aa MW: 27714.4 Da PI: 9.4799

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.4	1.8e-09	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd++lv +++ +G g+W++ ++ g RWV87557.1 14 KGAWTKEEDLRLVSYINAHGEGCWRSLPKAAG 45 79************************999887 PP
2	Myb_DNA-binding	29.7	1.5e-09	85	109	22	47
T-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqky 47 ++W+ Iar+++ gRt++++k++w+++ RWV87557.1 85 RRWSVIARRLP-GRTDNEIKNYWNTH 109 47*******.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDLRLVSYIN AHGEGCWRSL PKAAGLLHLP YCHLISSPLP 60 SFFPDIVVFR PSTVRQERIP RFRVRRWSVI ARRLPGRTDN EIKNYWNTHI RRKLLGRGLD 120 PQTHRPIGGD SQSTASCEQH ACSGVTMDQG RRRCPDLNLH LDLTMSVPYA SPRSSTSSEV 180 LTAPAEAEAE ATTPASVLPH ARTICFCYHL GFRSSQVCSC QTSSTAPVLG RREPNHSSRA 240 SSSARHQSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	8e-51	MYB family protein