PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87635.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MIKC_MADS

Protein Properties

Length: 205aa MW: 23002.6 Da PI: 9.8983

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.5	1.8e-28	31	81	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien +nrqvt+skRr+gi+KKA+EL vLCda+v++i+fsstgk+ ey+s RWV87635.1 31 KKIENPTNRQVTYSKRRTGIMKKAKELTVLCDAQVSIIMFSSTGKFSEYCS 81 68***********************************************96 PP
2	K-box	34.4	9.6e-13	92	124	37	69
K-box 37 hllGedLesLslkeLqqLeqqLekslkkiRskK 69 +++Ge+L+ L++keL+ Leq+L+++lk +R++K RWV87635.1 92 QRMGEGLDGLDMKELRGLEQNLDEALKVVRDRK 124 79******************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MSEANRSGDM RKREGRRELG TEMGRGKIEI KKIENPTNRQ VTYSKRRTGI MKKAKELTVL 60 CDAQVSIIMF SSTGKFSEYC SPTTEYASNP WQRMGEGLDG LDMKELRGLE QNLDEALKVV 120 RDRKVCDLSC ASRVGGKEPR IRLERSAARV VGLRCKSLYS NSNEYPYLNP LSYLLLTIPL 180 HLTTPSVVLV ARRASAAEGC RPCPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54340.1	1e-34	MIKC_MADS family protein