PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV87688.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 183aa    MW: 19797.6 Da    PI: 8.5185
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV87688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.27.6e-40131071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+C++dC++ap+fpa++p+kfanvhk+FGasnv+kll++     r da+sslvyeA+ar+rdPvyG+v+ i++l++q++ l+a+la++++
  RWV87688.1  13 PCAACKLLRRRCTQDCIFAPHFPADEPHKFANVHKVFGASNVSKLLQH-----RGDAVSSLVYEANARVRDPVYGCVAAISTLHRQIQALQAQLAMAQA 106
                 7*********************************************99.....*******************************************998 PP

      DUF260 100 e 100
                 +
  RWV87688.1 107 Q 107
                 7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MKELARKHST VSPCAACKLL RRRCTQDCIF APHFPADEPH KFANVHKVFG ASNVSKLLQH  60
RGDAVSSLVY EANARVRDPV YGCVAAISTL HRQIQALQAQ LAMAQAQMVH LRMSHAASLA  120
RAGLGHSPMG AGSTSTGSSS MSPTHNQLLE EPDTTVNAKP VFALDMVALD QTNLESEPPI  180
WSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.16e-54LBD family protein