PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87780.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 118aa MW: 13285.5 Da PI: 8.9276

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	87	2.6e-27	49	115	1	67
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAea 67 +CaaCk+lr+kC+++ v+apyfp +qp+kf v+++FGasnv+kll++l++ +red+++sl+y+A++ RWV87780.1 49 PCAACKFLRQKCQPESVFAPYFPPDQPQKFVHVQRVFGASNVTKLLHELHPYKREDVVNSLAYKADI 115 7****************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence
MVPNLQKRKL QETHYREQLL LALVFYACLP VSAVREMVSA VAAAAAASPC AACKFLRQKC 60 QPESVFAPYF PPDQPQKFVH VQRVFGASNV TKLLHELHPY KREDVVNSLA YKADIVEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	5e-34	LBD family protein