PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV87824.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 450aa MW: 49520 Da PI: 9.1377

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV87824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0015	106	128	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C ++F + L H+r+H RWV87824.1 106 HRCKRCYRRFANGRALAGHMRSH 128 79********************6 PP
2	zf-C2H2	11	0.0013	284	306	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k+F++ L H +H RWV87824.1 284 FRCGTCRKVFRSYQALGGHRASH 306 89**********99999998887 PP
3	zf-C2H2	10.8	0.0016	340	362	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C ++F + L H rtH RWV87824.1 340 WRCPYCYRVFGSGQALGGHKRTH 362 58*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MRRDALDVPL PGGCRPQIHA KDPPLGSSAL RCSSASSASC PSSDERSQGK SGKGKVGSLE 60 EGERKGKEGG RSGEDQEAAK GGRESDGTVG GAANDPNFSN EAMERHRCKR CYRRFANGRA 120 LAGHMRSHHV VPVRLPRPFP SPSAASSSSP VAAMEAEEEK GPATYAFREK RVKSFWLADP 180 GFSFTSAFED RESDTESFLH RWPKRRRSVP AEIPAAEEPL SSVSDVFSEE AVARWLMLLS 240 RDAWSTYEAE ERKSNGWDEV EAEKYVEEEE NGIGSRSRRR RSRFRCGTCR KVFRSYQALG 300 GHRASHKRER MECVPTAAMM RIHSEDFSGA SAAHHDAKLW RCPYCYRVFG SGQALGGHKR 360 THLSSAAAAT SPAPHLPHPP SPVAAVHRNN GGRDLNLPSP SEEEAELSQQ SSHASDFLSP 420 KRRLFGGNSN QILRQGAPNS IQDLIFLKRE

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MRRDALDVPL PGGCRPQIHA KDPPLGSSAL RCSSASSASC PSSDERSQGK SGKGKVGSLE  60
EGERKGKEGG RSGEDQEAAK GGRESDGTVG GAANDPNFSN EAMERHRCKR CYRRFANGRA  120
LAGHMRSHHV VPVRLPRPFP SPSAASSSSP VAAMEAEEEK GPATYAFREK RVKSFWLADP  180
GFSFTSAFED RESDTESFLH RWPKRRRSVP AEIPAAEEPL SSVSDVFSEE AVARWLMLLS  240
RDAWSTYEAE ERKSNGWDEV EAEKYVEEEE NGIGSRSRRR RSRFRCGTCR KVFRSYQALG  300
GHRASHKRER MECVPTAAMM RIHSEDFSGA SAAHHDAKLW RCPYCYRVFG SGQALGGHKR  360
THLSSAAAAT SPAPHLPHPP SPVAAVHRNN GGRDLNLPSP SEEEAELSQQ SSHASDFLSP  420
KRRLFGGNSN QILRQGAPNS IQDLIFLKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	6e-30	C2H2 family protein