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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV88041.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | ERF | ||||||||
| Protein Properties | Length: 193aa MW: 20910.6 Da PI: 10.2708 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 67.1 | 3.3e-21 | 34 | 84 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++++GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa+a+++a+++l+g
RWV88041.1 34 THFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARNLRG 84
589*******.**********883....5*************************99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 193 aa Download sequence |
MALETMRLRK GGFAATAAEN KGSTVVLGGE VRETHFRGVR KRPWGRFAAE IRDPWKKTRK 60 WLGTFDTAEE AARAYDEAAR NLRGPKAKTN FGCPGDHGIQ SSATQISWAA VPRWRSALDG 120 RDLTIGPPPA LPGGGSGRLG YGLGTVEVAT RGDQGMEKAL GVAVERKVED EEAEAAKQKQ 180 PFSFDLNLPA PFF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G50640.1 | 4e-25 | ERF family protein | ||||




