PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV88139.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family bHLH
Protein Properties Length: 145aa    MW: 15790 Da    PI: 6.9198
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV88139.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.14.9e-06981371255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 RR++i +++  L+ l+P +    +k   Ka iL + ++Y++ Lq
  RWV88139.1  98 RRKKISERMKMLQGLVPGC----DKVTGKALILDEIINYVQCLQ 137
                 9*****************9....555***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MASTHWDSAC VSKTTAEMLL LMPQQQVAVA AAAVTDFDSS SSLDTGTDAP SADGFMVRSP  60
LSSELHVSEK VQNQHGRVDH KRKSRGEASL VTGESEVRRK KISERMKMLQ GLVPGCDKVT  120
GKALILDEII NYVQCLQNQV EVNCK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
181101KRKSRGEASLVTGESEVRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.24e-23bHLH family protein