PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV88221.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 177aa    MW: 19464.4 Da    PI: 10.4223
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV88221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.51.8e-28125175151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 k+i+n+  rqvtfskRr g++KKA ELSvLCda+va+i+fsstgkl+e++s
  RWV88221.1 125 KKIDNTAARQVTFSKRRRGLFKKAAELSVLCDADVALIVFSSTGKLFEFCS 175
                 68***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MYVWHDKTSV GSQKETVTRR DDDVPGLGGP HAARNSRACA VGVSGSGYAT PQPSWAPLAV  60
RPWLKRHPTH ALLVFGVCHL AYTYFVRTCM QANVGGINPH EHSPLRVILK TAGGETMVRE  120
KIQIKKIDNT AARQVTFSKR RRGLFKKAAE LSVLCDADVA LIVFSSTGKL FEFCSSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.14e-34MIKC_MADS family protein