PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV88353.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 600aa MW: 66819.2 Da PI: 8.5267

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV88353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	67.9	2e-21	169	216	1	48
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 +Cqv++C+adls+ak+yhrrhkvCevhsk++++lv +++qrfCqqCsr RWV88353.1 169 ICQVDDCKADLSSAKDYHRRHKVCEVHSKTAKALVGKQMQRFCQQCSR 216 5**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MGREVGEQVV PPVFFHRHRA LPGPFHESLL PSKKRDFPWK NNPSFPHNQQ HERQLQRLMG 60 ASLPNHGGNW NPDMWDWDSV RFTAKPLADA SNVLCLGSQP SSAAAATVDQ KKKRPDGSKD 120 LALGRSLGED DENLALKLGG EAYSVDQPAA RPNKRVRSGS PVSGGNCPIC QVDDCKADLS 180 SAKDYHRRHK VCEVHSKTAK ALVGKQMQRF CQQCSRRRLA GHNRRRRKTQ PLDASSRPSL 240 PRNQENGTNW NLDVVNLLVT LASPADNESP AELGSASKYL SSESSNPLDE RSPSSSPPVT 300 KKLFPLHSTM ELVKYAQVSE CQEDNATVEL STSHGGSVPL DLFKESEMRV ENGAVQSVLH 360 QTRYKSSSLD HSPASSNSDA QLEDDLLQRV TSLVQHSGTD FWRNGRFLVR TNKQLVSHKD 420 GKIRLSKTWR AWSAPELTSV SPIAVVSGQE TSFFLKGRNL TVPGTKIHCT YMGKYVSKEV 480 LCSAYPGTIY DDSCIERFEF PGGYPESFEI DLLSRAVKRK SKTMVDLFLH YYVSHGKDET 540 KLYLFPPNMA GLGGVTPLHM AASMQDSEDM VDALTNDPQE VKLVLTFYNL QVQWHTQHCN

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MGREVGEQVV PPVFFHRHRA LPGPFHESLL PSKKRDFPWK NNPSFPHNQQ HERQLQRLMG  60
ASLPNHGGNW NPDMWDWDSV RFTAKPLADA SNVLCLGSQP SSAAAATVDQ KKKRPDGSKD  120
LALGRSLGED DENLALKLGG EAYSVDQPAA RPNKRVRSGS PVSGGNCPIC QVDDCKADLS  180
SAKDYHRRHK VCEVHSKTAK ALVGKQMQRF CQQCSRRRLA GHNRRRRKTQ PLDASSRPSL  240
PRNQENGTNW NLDVVNLLVT LASPADNESP AELGSASKYL SSESSNPLDE RSPSSSPPVT  300
KKLFPLHSTM ELVKYAQVSE CQEDNATVEL STSHGGSVPL DLFKESEMRV ENGAVQSVLH  360
QTRYKSSSLD HSPASSNSDA QLEDDLLQRV TSLVQHSGTD FWRNGRFLVR TNKQLVSHKD  420
GKIRLSKTWR AWSAPELTSV SPIAVVSGQE TSFFLKGRNL TVPGTKIHCT YMGKYVSKEV  480
LCSAYPGTIY DDSCIERFEF PGGYPESFEI DLLSRAVKRK SKTMVDLFLH YYVSHGKDET  540
KLYLFPPNMA GLGGVTPLHM AASMQDSEDM VDALTNDPQE VKLVLTFYNL QVQWHTQHCN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	5e-39	SBP family protein