PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV88420.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LSD
Protein Properties Length: 227aa    MW: 25379.3 Da    PI: 7.676
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV88420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD139.77.7e-13174198125
     zf-LSD1   1 CggCrtlLsYPrGApsVRCalCdtV 25 
                 Cg+C+ lL+Y +GA+sV+Ca+C++V
  RWV88420.1 174 CGNCHMLLMYQYGARSVKCAVCNFV 198
                 ***********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
RRVSTTTTTT TTTVFLQQPQ RVRRPERCLA DFDFVVLVTD SYETGVGIEY MSTMALMDLE  60
DCYNFRFSLF DSLQRGNMNK NPSFLTQIGD GSANLCLMLK EDTVLGRRIR HQSEMPVTLA  120
PYPTPPVPFT TPNGICLLVH MENKQLMHDH IFLCVKVTNF TCLVAANQVA HVNCGNCHML  180
LMYQYGARSV KCAVCNFVTS VGVSIHGNAL PFYLNIFSVN TLSGISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32540.33e-19LSD family protein