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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV88666.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | ERF | ||||||||
| Protein Properties | Length: 149aa MW: 16512.5 Da PI: 5.827 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 63.4 | 4.8e-20 | 6 | 53 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53
+y+GVr+++ +g+Wv+eIr+p+ +r++lg+fgtae+Aa+a+++a++ +
RWV88666.1 6 RYRGVRQRH-WGSWVSEIRHPV----MkTRIWLGTFGTAEDAARAYDEAARLM 53
69******9.**********63....35*********************9876 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 149 aa Download sequence |
MPRLQRYRGV RQRHWGSWVS EIRHPVMKTR IWLGTFGTAE DAARAYDEAA RLMCGSKART 60 NFPVDPNYSI SAPALSPGLM AKLEKCCSAS RGEGKRGEVV APVGREEEAE VTRVDDEYIE 120 EMIEELIYNG SLEISSSSSS SSSSSSSYL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G25190.1 | 5e-32 | ERF family protein | ||||




