PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV88829.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

WOX

Protein Properties

Length: 187aa MW: 20491.4 Da PI: 11.0263

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV88829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.6	2.5e-19	96	155	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq++ Le+l++ r+p+ ++e+ +++l +++ ++V++WFqN++a+e++ RWV88829.1 96 TRWNPTPEQIKLLEALYQAgMRTPNPVQIERVTAELgqygRIEGKNVFYWFQNHKARERQ 155 7***************99************************************97 PP
2	Wus_type_Homeobox	115.6	2.4e-37	96	157	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+PtpeQik+Le+ly++G+rtPn +i+r+taeL +yG+ie+kNVfyWFQN+kaRerqkq RWV88829.1 96 TRWNPTPEQIKLLEALYQAGMRTPNPVQIERVTAELGQYGRIEGKNVFYWFQNHKARERQKQ 157 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MKVHTLGSWE QVPSSPSTSS SLSSSSANNP KRLRPLAPRL TSAAVSTTVA TEISAPPKLR 60 KSLGSAMTAK CASIDLDVSL VLRHNWVQIQ MQSGGTRWNP TPEQIKLLEA LYQAGMRTPN 120 PVQIERVTAE LGQYGRIEGK NVFYWFQNHK ARERQKQKRS ELLANAATAA PLPHPKVGNT 180 ILGANRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	4e-35	WOX family protein