PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV88868.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GeBP

Protein Properties

Length: 457aa MW: 50502.6 Da PI: 4.8679

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV88868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	106.2	2.4e-33	225	322	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 lfqrlws + ei+lL+Gl+++++k+g+ + +d++++ +f+k+s + ++s++qlv+K+rrLKkKf+++ ++ak+g +p+f+k+h+q+ ++lskk+Wg RWV88868.1 225 LFQRLWSLDNEIALLKGLVEYRSKKGTvaASAHDMEDLRNFIKGSFQTDFSNTQLVDKVRRLKKKFETNNARAKNGADPTFTKPHEQDGYKLSKKVWG 322 79**********************9877778**************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MSSKRAAAEA ESSASDSSYA SSSSDEKGGQ EADVRLSSIP QVPKPMKPSK HPSAATSSHE 60 GEEDDDDSSN EEDGQRNKQQ GDNGSEEEEE EDDDEGSSDE GSDSDDANTM NKPLPPPPPP 120 PPPPKPQFQP LPKPTSEPSD SGSSGDSDSE SDSSDDAPVT PASRPSRAVD PSIKPINTKP 180 MDTPNKPSKQ ANSPVPLQDR ESLKRKHEVV ERSELDNHGG QKRQLFQRLW SLDNEIALLK 240 GLVEYRSKKG TVAASAHDME DLRNFIKGSF QTDFSNTQLV DKVRRLKKKF ETNNARAKNG 300 ADPTFTKPHE QDGYKLSKKV WGINKISSEH LDANSADSED NEESESEMMN IRKSNEQQMT 360 SLVVSKCHDA IVCDSGDIVR VNIQFPYLWE TVTKMADEYL CGIAIKRALE MLDVAKAKSM 420 EEKLKKLKTT QMRQHLRRID LNKETVKLIL DAIGRSK

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MSSKRAAAEA ESSASDSSYA SSSSDEKGGQ EADVRLSSIP QVPKPMKPSK HPSAATSSHE  60
GEEDDDDSSN EEDGQRNKQQ GDNGSEEEEE EDDDEGSSDE GSDSDDANTM NKPLPPPPPP  120
PPPPKPQFQP LPKPTSEPSD SGSSGDSDSE SDSSDDAPVT PASRPSRAVD PSIKPINTKP  180
MDTPNKPSKQ ANSPVPLQDR ESLKRKHEVV ERSELDNHGG QKRQLFQRLW SLDNEIALLK  240
GLVEYRSKKG TVAASAHDME DLRNFIKGSF QTDFSNTQLV DKVRRLKKKF ETNNARAKNG  300
ADPTFTKPHE QDGYKLSKKV WGINKISSEH LDANSADSED NEESESEMMN IRKSNEQQMT  360
SLVVSKCHDA IVCDSGDIVR VNIQFPYLWE TVTKMADEYL CGIAIKRALE MLDVAKAKSM  420
EEKLKKLKTT QMRQHLRRID LNKETVKLIL DAIGRSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	2e-21	GeBP family protein