PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV89094.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 241aa    MW: 28035.5 Da    PI: 8.3489
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV89094.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.71.6e-2860109150
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 
                 krien++nrqvtfskRrng++KKA+ELSvLCd+++a+i+fs++g+l  +s
  RWV89094.1  60 KRIENNTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSHFS 109
                 79********************************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MLTAEACLLT STKTTEAPEN DENSNSNRQS CCGSHLCHEH VEQESSSQHL IAYRAALQIK  60
RIENNTNRQV TFSKRRNGLI KKAYELSVLC DIDIALIMFS PSGRLSHFSG PTHVLFRIIY  120
LHSHFDVIVS LIYYMQELQQ EICRYQQQLQ LMELRLRYCP THKILIKLVP YCFRMNRFFE  180
PDPLSFTSIA DLESCEKFVM EALQRVTARK VSPHSFRCFL SPAMFTKGVM VLVYYACRNI  240
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77980.11e-34MIKC_MADS family protein