PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV89345.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family ARF
Protein Properties Length: 307aa    MW: 35086.3 Da    PI: 9.8503
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV89345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.71.1e-2344145199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++iyr++++r++lt+GW+ F +a++L +gD+v+F   ++++ +l
  RWV89345.1  44 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIYRGQPKRHLLTTGWSVFISAKRLVAGDSVLFI--WNEKNQL 138
                 99*****************************8544444..48************************************************..8899999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  RWV89345.1 139 LLGIRRA 145
                 ****997 PP
2Auxin_resp119.82.2e-39170253183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+v+YnPra++seFv++++k++ka+  ++vsvGmRf+m fete++s rr++Gt++g+sd+dpvrWpnS+Wrs+k
  RWV89345.1 170 AAHAAATNSRFTVFYNPRATPSEFVIPLSKYLKAVFhTRVSVGMRFRMLFETEECSVRRYMGTITGLSDMDPVRWPNSHWRSVK 253
                 79********************************87599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MHADVETDEV YAQMTLQPLS LQEQKDAYFP IEMGVVSKQP TNYFCKTLTA SDTSTHGGFS  60
VPRRAAEKVF PPLDFSQQPP AQELIARDLH DVEWKFRHIY RGQPKRHLLT TGWSVFISAK  120
RLVAGDSVLF IWNEKNQLLL GIRRANRPQT VMPSSVLSSD SMHIGLLAAA AHAAATNSRF  180
TVFYNPRATP SEFVIPLSKY LKAVFHTRVS VGMRFRMLFE TEECSVRRYM GTITGLSDMD  240
PVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP MYPSLFPLRL KRPWHSPLPH  300
GIILQPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein