PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV89590.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 373aa MW: 40412.4 Da PI: 7.2618

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV89590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	93.1	3.1e-29	25	134	2	102
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT......X..TTSEEEEESXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks......k..ekiweFkhksFkkg 89 Fl+k+y++++d+++++++sw ++ ++fvv+ + efa++vLp++Fkh+nf+SFvRQLn+Y + + k ++ weF+++ F+kg RWV89590.1 25 FLTKTYQLVDDPDTDHIVSWGdDRTSTFVVWRPPEFARDVLPNFFKHNNFSSFVRQLNTYVYFVPCSLVFLCFPlflgfrKvvPERWEFANEFFRKG 121 9******************667799*****************************987665555543336776651569********* PP XXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkks 102 +k+ll++i+r+k+ RWV89590.1 122 EKHLLCDIHRRKT 134 ********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MEMCWEGGGG GGVAADANKP VPAPFLTKTY QLVDDPDTDH IVSWGDDRTS TFVVWRPPEF 60 ARDVLPNFFK HNNFSSFVRQ LNTYVYFVPC SLVFLCFPLF LGFRKVVPER WEFANEFFRK 120 GEKHLLCDIH RRKTCSSSSS SFPFASSSAS FPLYHHFDDY RLAVPHWQDA TPSSRILLLG 180 GNDIEAANAV RMVGGVGGAG SGQATAAGLL EENESLRRSN AALLSELAHM RKLYNDIIYF 240 VQNHVRPVAP SSAAAAASAN FLLPSSFQRS GGRTSGSPTS SSSLTIADEP SPPPLDNATN 300 DKSRGCNEES SSAKPKLFGV PLDGCTSSSS SNSKRGLDVH GTTTSPSPST KPRLVLDKED 360 LGLKLMPSSP PPC

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MEMCWEGGGG GGVAADANKP VPAPFLTKTY QLVDDPDTDH IVSWGDDRTS TFVVWRPPEF  60
ARDVLPNFFK HNNFSSFVRQ LNTYVYFVPC SLVFLCFPLF LGFRKVVPER WEFANEFFRK  120
GEKHLLCDIH RRKTCSSSSS SFPFASSSAS FPLYHHFDDY RLAVPHWQDA TPSSRILLLG  180
GNDIEAANAV RMVGGVGGAG SGQATAAGLL EENESLRRSN AALLSELAHM RKLYNDIIYF  240
VQNHVRPVAP SSAAAAASAN FLLPSSFQRS GGRTSGSPTS SSSLTIADEP SPPPLDNATN  300
DKSRGCNEES SSAKPKLFGV PLDGCTSSSS SNSKRGLDVH GTTTSPSPST KPRLVLDKED  360
LGLKLMPSSP PPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	5e-76	HSF family protein