PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV89690.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 314aa MW: 34335.4 Da PI: 8.11

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV89690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.5	3.1e-08	14	53	1	39
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkq 39 +g+W++eEd +l++ + ++G+g +W + +++ gk R+ + RWV89690.1 14 KGPWSPEEDTKLKEFIGKHGTGgNWIALPQKAGKFRSSSH 53 79******************************98888765 PP
2	Myb_DNA-binding	27.7	6.4e-09	85	109	20	46
TTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqk 46 G +W+ Ia++++ gRt++++k++w++ RWV89690.1 85 GC-RWSIIASHLP-GRTDNDIKNYWNT 109 33.5*******.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MGRTPCCDKA HVKKGPWSPE EDTKLKEFIG KHGTGGNWIA LPQKAGKFRS SSHSRCFFPF 60 FGQNLHLNPQ KGMLLNPTLS LSSDGCRWSI IASHLPGRTD NDIKNYWNTK LKKKFLGIVS 120 SQKKQQHQLQ QQQHHNLFSS LFSLSQGGCN TNTAPDLELV TGLGEFPSLI SQRIPGFASA 180 STSTAAASAL LQAPYRQPLQ MLERRSSSNT MIAFGNSDPS CNSSGGSCTQ ISYGTELEYD 240 CDIARGFEGA QISIDNYSTY GGLEYDSRSL RPGGGGGHVE TPLDYTYEEI KHLLCSNNSG 300 CNPINNDHNP SLLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	5e-41	MYB family protein