PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV89920.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 183aa    MW: 19509.3 Da    PI: 11.8868
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV89920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26047.26.5e-15262156
      DUF260  1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeered 56
                +C++C++lrr+C+++C l+p++     +++q++++ +v+k+FG++ ++++++a+p ++r+ 
  RWV89920.1  2 SCNGCRILRRGCSDSCLLRPCLqwidsAEAQAHATVFVAKFFGRAGLMSFISAVPSSQRPG 62
                6*********************9999777889**************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MSCNGCRILR RGCSDSCLLR PCLQWIDSAE AQAHATVFVA KFFGRAGLMS FISAVPSSQR  60
PGSSPSTSLI CTVSSLLSPE PSVLTRPNPF GRSSVPILAL RGVRADHQPG ERRRGPAVDR  120
QLAPLPGGGG DRPPRRRAPP ALEYRRRGPR RRRDAGGGRP PPSHEDGVLL LLFGQAAEGA  180
GSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135153RRRAPPALEYRRRGPRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37540.14e-30LBD family protein