PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV90061.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 336aa MW: 38075.1 Da PI: 10.5844

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV90061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00013	220	243	1	22
EEET..TTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt 22 y C C++sFs+k +L H r RWV90061.1 220 YACDieGCSMSFSTKQDLALHKRD 243 789999***************985 PP
2	zf-C2H2	13.5	0.00021	245	267	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L +H ++H RWV90061.1 245 CPvkGCGKKFFSHKYLLQHRKVH 267 9999*****************99 PP
3	zf-C2H2	14.7	8.7e-05	303	329	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg++F+ s++ rH r+ H RWV90061.1 303 YVCQepGCGQTFRFVSDFSRHKRKtgH 329 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MPYNPVIYNA FGQKSAGDSP EKPKTSGRRT GRQKKIIVAG RWCGKVWMTN QVHPYLAHKT 60 ETQEQEQTEE YYSSDTDQNP LDEIDIDHSS KVTSKSNSSG SNLAVKSSGK KRKKPSRKAK 120 SKKPRCTMAD CKSKANDASG TSASPPGRTP RSSCPRNSES TKQHKSNLKD EAGGPSSRLR 180 KRPSKSEEQK NKLANKKQSN KRKAKNNQTA SLVLKDEEEY ACDIEGCSMS FSTKQDLALH 240 KRDICPVKGC GKKFFSHKYL LQHRKVHMDD RPLECPWKGC KMTFKWPWAR TEHIRVHTGD 300 RPYVCQEPGC GQTFRFVSDF SRHKRKTGHS VKKGRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	114	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	1e-65	C2H2 family protein