PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV90309.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 281aa MW: 30516.1 Da PI: 6.386

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV90309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00027	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H+ +H RWV90309.1 129 YVCKTCNKCFPSFRALGGHLASH 151 9***********99999999888 PP
2	zf-C2H2	13.1	0.00028	192	214	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H RWV90309.1 192 HECSICGSGFSSGQALGGHMRRH 214 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MEAVEESLGY NSYEHSHCDS EFAHPTIVAK GKRTKRQRSH QLRQSQSIAI TGSSSDSSTE 60 ISESVTEEDE HMANCLILLA QGHTFDAGRE PETPSTEEAT GVADGGKYAS RRYDEAAATD 120 SGKGEFCVYV CKTCNKCFPS FRALGGHLAS HKKPKLSTLM PAEEKKATAH DDSLQILTTS 180 FSMPVNTKSK IHECSICGSG FSSGQALGGH MRRHRPVVVP ENQQGQKGRS LLPLDLNLPV 240 PADDERDEAQ IPSPPLHDFA LAGKLPVVLP PSVSVWVDCH Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	2e-37	C2H2 family protein