PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV90367.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 330aa MW: 37147.1 Da PI: 8.3982

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV90367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.5e-12	145	196	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+ +N +++Lr+l+P++ ++ + a+i A+e++k+L+ RWV90367.1 145 QRMTHIAVERNRRHLMNVHLATLRSLMPPS---FVQRGDQASIIGGAIEFVKELE 196 79*************************9...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MSCGSLSSHQ TPVLRLLQGA MQAGEEMVEE EVQLHLQQYQ HRSFFTSYPQ ETNFQLLRRM 60 QSQCHLRQLR MPEMDRSCAV EQLESCVTHV SESETRGVVP RDDPATAAAT GPMRSPAAAG 120 SNERRKRKRQ RPASASKSAE EAESQRMTHI AVERNRRHLM NVHLATLRSL MPPSFVQRGD 180 QASIIGGAIE FVKELEQHLL SLRGEKRFHE SAFADDRCRA PLPLLHDDFL IAPQYTGYSQ 240 SQRRRRDGNG EEANQEDWTG VDVEATLVQG HVNLKVAGRR QRGQLVRAIA AMEELRLSIL 300 HLNITSLGPS SILYSLSLKV GWSVACSLFQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	129	RRKRKR
2	126	131	KRKRQR
3	146	157	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	3e-45	bHLH family protein