PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV90575.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 350aa MW: 36102.6 Da PI: 6.2627

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV90575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.5	3.4e-36	67	160	6	104
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaa.kskksqks 103 r++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti+WLl+ a+pai ++tgt++++a ++ + +++ +++ +a+++a ++ s+ RWV90575.1 67 NRTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIQWLLEHAEPAIVAATGTGTIPAIAT------NVGGTLKIPTEAPTSApVTSTSTPA 159 69**********************************************************99999444......2222223332222222122222222 PP TCP 104 a 104 a RWV90575.1 160 A 160 2 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MESQKRDQED GRRKTAEGGG GVGGVLGGGV AVPPSGVLPV HRFIVPKPEP LEMLGMGAFH 60 IIRRPANRTK DRHTKVEGRG RRIRMPAACA ARIFQLTREL GHKSDGETIQ WLLEHAEPAI 120 VAATGTGTIP AIATNVGGTL KIPTEAPTSA PVTSTSTPAA ADDTAVDDEG AGKKRRKKLQ 180 PLRTGGGTVV AGYYPVQNPM LPVGGAITMS SGLAPMGSGA QGLVPMWTLG GSAAGASVIP 240 PGPLWVLPPP SSTAGPSSQS QVWTFPQAPQ IIHLAAVRPA STDTLFSSGA AGVNVATLAG 300 AQPKAPAAGG KRELQLMSDP GAFQRGQARE VDDEDDDEDD EDDSSAEDYN

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MESQKRDQED GRRKTAEGGG GVGGVLGGGV AVPPSGVLPV HRFIVPKPEP LEMLGMGAFH  60
IIRRPANRTK DRHTKVEGRG RRIRMPAACA ARIFQLTREL GHKSDGETIQ WLLEHAEPAI  120
VAATGTGTIP AIATNVGGTL KIPTEAPTSA PVTSTSTPAA ADDTAVDDEG AGKKRRKKLQ  180
PLRTGGGTVV AGYYPVQNPM LPVGGAITMS SGLAPMGSGA QGLVPMWTLG GSAAGASVIP  240
PGPLWVLPPP SSTAGPSSQS QVWTFPQAPQ IIHLAAVRPA STDTLFSSGA AGVNVATLAG  300
AQPKAPAAGG KRELQLMSDP GAFQRGQARE VDDEDDDEDD EDDSSAEDYN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	177	KKRRK
2	173	178	KKRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	7e-30	TCP family protein