PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV90610.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 351aa MW: 37899.1 Da PI: 9.87

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV90610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.1	7.1e-06	202	224	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg++F+ +++L+ H+ + H RWV90610.1 202 SCSECGEVFTKPETLELHQAVrH 224 7******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MVEGRRASIL THPFAALILM VLTSVFPVAT TANRQRHQHS HPDDQHERKK TTSKKKKKPP 60 PSPPTETQLP PSSSSSWEQF KGLLSCRTTA ASRVHDPAST AAKLGRAACG PSICALRDVV 120 VHRSDTDPHS DAGSTSQRET APLAPAARPG RHLPPPVSSL GCGSYYSRGG LQLPKLAGCY 180 ECHAVSIDPS SRYPRPRTTL CSCSECGEVF TKPETLELHQ AVRHAVSELG AEDSGRNVVE 240 IIFKSSWQKK DHPMCKIERI LKVHNARSAV APFEDYRAAV KFRRRHLPSR CAADGNELLR 300 FHCTSLACAL GARGSTSLCS GSISSSPCGV CTIIRHGFGG APHPRGVRTT A

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MVEGRRASIL THPFAALILM VLTSVFPVAT TANRQRHQHS HPDDQHERKK TTSKKKKKPP  60
PSPPTETQLP PSSSSSWEQF KGLLSCRTTA ASRVHDPAST AAKLGRAACG PSICALRDVV  120
VHRSDTDPHS DAGSTSQRET APLAPAARPG RHLPPPVSSL GCGSYYSRGG LQLPKLAGCY  180
ECHAVSIDPS SRYPRPRTTL CSCSECGEVF TKPETLELHQ AVRHAVSELG AEDSGRNVVE  240
IIFKSSWQKK DHPMCKIERI LKVHNARSAV APFEDYRAAV KFRRRHLPSR CAADGNELLR  300
FHCTSLACAL GARGSTSLCS GSISSSPCGV CTIIRHGFGG APHPRGVRTT A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	7e-73	C2H2 family protein