PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV90927.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family YABBY
Protein Properties Length: 147aa    MW: 16691.5 Da    PI: 9.6763
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV90927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY43.31.3e-1340117165
       YABBY   1 advfssseqvCyvqCnfCntilav............svPstslfkvvtvrCGhCtsllsvnlakasql.laaeshlde 65 
                 +d++s  e++Cyv+C++Cnt+lav             vP++ ++ +vtvrCGhC ++  ++ + + q   +++++l+ 
  RWV90927.1  40 MDLVSPMEHLCYVRCTYCNTVLAVipsinlfswlqvGVPKKPMMDTVTVRCGHCNHVSFLSHRPMEQShSPTNHQLGL 117
                 5788999**************98544333333332279****************987555555444430344444554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
TLSHGARHIP VKNSWTQESR LPLLSLSSPS SSSISLYVLM DLVSPMEHLC YVRCTYCNTV  60
LAVIPSINLF SWLQVGVPKK PMMDTVTVRC GHCNHVSFLS HRPMEQSHSP TNHQLGLQVS  120
SPCLFRFVML TPEKKHRIPS AYNRFMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.16e-22YABBY family protein