PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV91216.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 232aa    MW: 26459.4 Da    PI: 9.1904
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV91216.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.53.2e-171153345
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                i n+s r  tf kR++g++KK +EL +LC++++++ii++++ +
  RWV91216.1 11 IANDSTRRATFKKRKKGLMKKVSELATLCNVKACMIIYGPQEH 53
                89*************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MARKKVNLAW IANDSTRRAT FKKRKKGLMK KVSELATLCN VKACMIIYGP QEHQPEAWPS  60
AQEAARLLER FKSMPEMEKS RKMMDQEGFL RQRAAKLQEQ LRRQERDNRE LEVSLLMHQA  120
VAGRSLYDVN VEDATSLAWM VDSKLKSVQD RINQQTTQLA LRSAAEASGT AQITAKNPME  180
MAMDSLQRQN WLLDAMHPSE NLVFGGGGGE EIMPISCVEH NSSWLDLYFP FN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVNLAWIANDSTRRATFKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.11e-47M-type_MADS family protein