PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV91500.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 570aa MW: 61567.1 Da PI: 9.0909

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV91500.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	2.9e-05	72	94	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H RWV91500.1 72 FICEVCNKGFQREQNLQLHRRGH 94 89*******************88 PP
2	zf-C2H2	12.3	0.00051	148	170	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C+k++ +s+ k H +t+ RWV91500.1 148 WKCDRCSKRYAVQSDWKAHAKTC 170 58******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MCCAQFTNGL KREGSNERLS FVLAPMGTDT KPKEGDGRVQ GLLYHGAHPS PHDPDAEVIA 60 LSPKTLLATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKNPKEARR RVYLCPEPTC 120 VHHDPSRALG DLTGIKKHYC RKHGEKKWKC DRCSKRYAVQ SDWKAHAKTC GTREYRCDCG 180 TLFSRFCLSP SISSMHSPIK SIRHYFPDRH HSCRRRPLIT RDSFITHRAF CDALAQESAR 240 LPTGMSAIGG HLYGNSSINL GLPPVNSHVS SLQSQSLPSA DLGRAPMQFD HLSSSAFRSP 300 QPQSSPFYLG GGSRQILENK TFSGLIQDMQ TTSSSSSAAA AGSLFNLSFF SDSRGMCAMN 360 SIDGNSEPAN LFDGNPMRNN NNIDMSYLLA SSVHNESAAA PLLSATALLQ KAAQMGVTCS 420 GRCGSSLFTG FGSTYSSGGG SKHANLRDEF KSNGPGQSSR TQVENDNHFQ NLMFSLANGS 480 SGIFGGGNER ETGLGGFSPG LCNLSSGGMG GADGLTRDFL GVGGVMRSMA RQTGDQIGVA 540 MASTLDSETK SGHCSLPSTD GNLHSRKSNP

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MCCAQFTNGL KREGSNERLS FVLAPMGTDT KPKEGDGRVQ GLLYHGAHPS PHDPDAEVIA  60
LSPKTLLATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKNPKEARR RVYLCPEPTC  120
VHHDPSRALG DLTGIKKHYC RKHGEKKWKC DRCSKRYAVQ SDWKAHAKTC GTREYRCDCG  180
TLFSRFCLSP SISSMHSPIK SIRHYFPDRH HSCRRRPLIT RDSFITHRAF CDALAQESAR  240
LPTGMSAIGG HLYGNSSINL GLPPVNSHVS SLQSQSLPSA DLGRAPMQFD HLSSSAFRSP  300
QPQSSPFYLG GGSRQILENK TFSGLIQDMQ TTSSSSSAAA AGSLFNLSFF SDSRGMCAMN  360
SIDGNSEPAN LFDGNPMRNN NNIDMSYLLA SSVHNESAAA PLLSATALLQ KAAQMGVTCS  420
GRCGSSLFTG FGSTYSSGGG SKHANLRDEF KSNGPGQSSR TQVENDNHFQ NLMFSLANGS  480
SGIFGGGNER ETGLGGFSPG LCNLSSGGMG GADGLTRDFL GVGGVMRSMA RQTGDQIGVA  540
MASTLDSETK SGHCSLPSTD GNLHSRKSNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	7e-99	C2H2 family protein