PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV91861.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 459aa MW: 49842 Da PI: 6.8903

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV91861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	361	383	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk Fs+ L H r+H RWV91861.1 361 HECLICGKAFSSGQALGGHKRRH 383 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MFQMEGDRLP PTARHRCKVC KKSFPCGRSL GGHMRSHGNL AIVGDGDERL QSSYGLRENP 60 KKTWRLSDSG GGDGEKCCGE CGKEFLSWRA LFGHMKCHSG RPNHAPEEAV EELEKQAECE 120 VKPIAVPRRR RRTRRTPAAA SCSLSGSERD REDEDGAINL MMLSRDVGRW GSGSGSSESS 180 VKNSVVLETG DFVLDGTERK GSELDDANRN GFKKMGSDDH FAGDDLDELK KPKICSSDTD 240 DLDGSRDESR KGCPDRNDPN SLTTTLKSDL EAVKCSSSDI DAKLDADHVT EKRSRFECAA 300 CKKTFGSYQA LGGHRASYKR TKSCPGSRTD GSKNSTATEE LVDPGEVSES SLGSSRKNKE 360 HECLICGKAF SSGQALGGHK RRHLVATSDA AGSAAYHILN QQQQQQQQPH EMSDLLDLNL 420 PATAAEGDSN STNAGSTESK SWWIGENLRH GTLVGVVSN

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MFQMEGDRLP PTARHRCKVC KKSFPCGRSL GGHMRSHGNL AIVGDGDERL QSSYGLRENP  60
KKTWRLSDSG GGDGEKCCGE CGKEFLSWRA LFGHMKCHSG RPNHAPEEAV EELEKQAECE  120
VKPIAVPRRR RRTRRTPAAA SCSLSGSERD REDEDGAINL MMLSRDVGRW GSGSGSSESS  180
VKNSVVLETG DFVLDGTERK GSELDDANRN GFKKMGSDDH FAGDDLDELK KPKICSSDTD  240
DLDGSRDESR KGCPDRNDPN SLTTTLKSDL EAVKCSSSDI DAKLDADHVT EKRSRFECAA  300
CKKTFGSYQA LGGHRASYKR TKSCPGSRTD GSKNSTATEE LVDPGEVSES SLGSSRKNKE  360
HECLICGKAF SSGQALGGHK RRHLVATSDA AGSAAYHILN QQQQQQQQPH EMSDLLDLNL  420
PATAAEGDSN STNAGSTESK SWWIGENLRH GTLVGVVSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	128	133	RRRRRT
2	128	135	RRRRRTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	1e-20	C2H2 family protein