PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV91900.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 214aa    MW: 24059.3 Da    PI: 10.9845
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV91900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.74.1e-30135184251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 rienk+nrqvtfskRr g+lKKA+ELS+LCdaeva+i+fss+g+l+e++s
  RWV91900.1 135 RIENKINRQVTFSKRRSGLLKKAYELSILCDAEVALIVFSSRGRLFEFCS 184
                 8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MGSRNASTVH HASSCGVTVL FVLATKQKEV KKREGFASAS TTTCTCEANK PSFITVTPLS  60
RLGSGRKRRG RWSVESSESE RRKARKKPAS YHNGSHARFR SGYWQHTQER SGDVERVGRG  120
GFTYTMGRGR VELRRIENKI NRQVTFSKRR SGLLKKAYEL SILCDAEVAL IVFSSRGRLF  180
EFCSSSRCHE NNSYIDSLLL SDFSFISFLL AANT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18088ERRKARKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.31e-33MIKC_MADS family protein