PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV91973.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 324aa MW: 34995.6 Da PI: 4.9009

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV91973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	82	8.2e-26	28	125	1	85
trihelix 1 rWtkqevlaLiearremeerlr.rgk...............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 rWt+qe+l+Li+++r +e+r r rg+ +p+W++vs+++r++g+ r+p+qC+++w+nl++++kkike+e ++ ++s + + + RWV91973.1 28 RWTRQEILVLIQGKRVVESRGRgRGAgrggggsgekgaaapPVEPKWASVSSYCRRHGVDRGPVQCRKRWSNLAGDFKKIKEWEARG---KESFWTMRN 123 8*****************99533355677778888888899****************************************97...445688877 PP trihelix 84 ql 85 +l RWV91973.1 124 DL 125 77 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MANAVDTAGS NGHDGAGGGG ARAPRLPRWT RQEILVLIQG KRVVESRGRG RGAGRGGGGS 60 GEKGAAAPPV EPKWASVSSY CRRHGVDRGP VQCRKRWSNL AGDFKKIKEW EARGKESFWT 120 MRNDLRRESR LPGFFDREVY DILDGAAVAE VEAEAEPAAE EEEEEGKKAF GRTAAAAGGE 180 DEEAVFDSGR TAAEDGLFSD YEEEKEAEDE AEDTAPPPQP VAAVPISGNA TARDKPQAEN 240 PGKSSPSRGG QKRRRTSPDE AEDCDLQSRL IEVLERNSRM LTAQLEAQNM NCQLDRDQRK 300 DQANGLLAVL GKLADALGRI ADKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	47	56	RGRGRGAGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	6e-48	Trihelix family protein