PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV92053.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 192aa MW: 22031 Da PI: 8.6958

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV92053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00048	49	65	1	17
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 ++Cp C k+F+r n++ RWV92053.1 49 FSCPVCYKTFNRYNNMQ 65 89*********988765 PP
2	zf-C2H2	16.1	3.2e-05	112	134	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F k + ++H +++ RWV92053.1 112 FMCRKCGKAFAVKGDWRTHEKNC 134 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
SEDHSAEKET EGGDDVVPIG YPSNPIGRLN KGQYWIPTPS QILIGPTQFS CPVCYKTFNR 60 YNNMQVSVSS SISCTCFNLL LMNNIDHPRS KPLKDFRTLQ THYKRKHGIK PFMCRKCGKA 120 FAVKGDWRTH EKNCGKLWYC ICGSDFKHKR SLKDHIKAFG RGHAAYGINR LEEEDDPSSE 180 IEQDCHQPHQ QR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-92	C2H2 family protein