PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV92534.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 443aa MW: 50008.9 Da PI: 4.8027

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV92534.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.3	3.2e-35	141	232	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e++ed+e++ ++sws+ nsfvv+d+++fa+ +LpkyFkhsnf+SF+RQLn+YgF+kv+ ++ weF++ F g+k+ll++ik RWV92534.1 141 FLSKTFEMVEDPETDAVVSWSRARNSFVVWDSHKFATALLPKYFKHSNFSSFIRQLNTYGFRKVDPDR---------WEFANADFLGGQKHLLKNIK 228 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r++s RWV92534.1 229 RRRS 232 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGSHSDDRSF WKPGGGIRNC WRQGTESLAV LPARPETAHP FAAFFPSFQK LPSASFFNHA 60 RSFLARAHSP HSNGAGEEEG LLAAIRFLVP DSGSRLRRPM ENAVLVANEE EEEEEEEEEE 120 GEAMAAPKPL MGLHEVGPPP FLSKTFEMVE DPETDAVVSW SRARNSFVVW DSHKFATALL 180 PKYFKHSNFS SFIRQLNTYG FRKVDPDRWE FANADFLGGQ KHLLKNIKRR RSVAQSSRQQ 240 HGGGTCVELG MFGLEAEADR LRRDRNVMML EIVKLRQRQQ SSRAQLLEME PRMQGTERRQ 300 QRTMAFLVRA LKSPTFIRQL VLRGQQQRQL GGAGKKRRLP ANPSSEDLLE LAIGSEMESV 360 SLSSTETDGA TPEPVDQSTA AVNDLTWEEL LNESILMEGD EEEGEHSEVE AEVEDLESAA 420 EQLEWEEDMK DLVMQMDYMS SNP

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGSHSDDRSF WKPGGGIRNC WRQGTESLAV LPARPETAHP FAAFFPSFQK LPSASFFNHA  60
RSFLARAHSP HSNGAGEEEG LLAAIRFLVP DSGSRLRRPM ENAVLVANEE EEEEEEEEEE  120
GEAMAAPKPL MGLHEVGPPP FLSKTFEMVE DPETDAVVSW SRARNSFVVW DSHKFATALL  180
PKYFKHSNFS SFIRQLNTYG FRKVDPDRWE FANADFLGGQ KHLLKNIKRR RSVAQSSRQQ  240
HGGGTCVELG MFGLEAEADR LRRDRNVMML EIVKLRQRQQ SSRAQLLEME PRMQGTERRQ  300
QRTMAFLVRA LKSPTFIRQL VLRGQQQRQL GGAGKKRRLP ANPSSEDLLE LAIGSEMESV  360
SLSSTETDGA TPEPVDQSTA AVNDLTWEEL LNESILMEGD EEEGEHSEVE AEVEDLESAA  420
EQLEWEEDMK DLVMQMDYMS SNP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	224	230	LKNIKRR
2	260	265	RLRRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	2e-81	HSF family protein