PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV92588.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 216aa MW: 24588.1 Da PI: 10.1973

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV92588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63	4.3e-20	111	165	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+eq++ Le+ Fe ++++ e++ eLA+klg++ rqV vWFqNrRa++k+ RWV92588.1 111 KKRRLTAEQVHLLERSFEAENKLEPERKGELARKLGMQPRQVAVWFQNRRARWKN 165 56789************************************************95 PP
2	HD-ZIP_I/II	129.6	1.3e-41	110	199	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 ekkrrl++eqv+lLE+sFe+e+kLeperK elar+Lg+qprqvavWFqnrRAR+k+kqlE+d+++Lk++y++l +++++L +e+++Lr++ RWV92588.1 110 EKKRRLTAEQVHLLERSFEAENKLEPERKGELARKLGMQPRQVAVWFQNRRARWKNKQLEHDFDRLKSSYNTLLADHDSLLRENDRLRSQ 199 69*************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MDSGRLIFHS SLSHGHHGQQ MILLGGGGGG PVFGGGFLCF FFRSCPRWFL LSCLGRLPGV 60 KLLRRGIFGI KGAGPALSAA EGASKRRPFF TSPDELLEEE YYYYDEQLPE KKRRLTAEQV 120 HLLERSFEAE NKLEPERKGE LARKLGMQPR QVAVWFQNRR ARWKNKQLEH DFDRLKSSYN 180 TLLADHDSLL RENDRLRSQA ISLSLSLSLS LSSIPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	167	RRARWKNKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-51	HD-ZIP family protein