PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV92624.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 335aa MW: 36116.3 Da PI: 8.5979

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV92624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.1	5.3e-37	72	193	5	112
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec....eaesssssasnsssg........... 88 +++++++hTkv+gR+RR+R++ +caar+F+L++eLG+++d++t+eWLlqqa+pa++++tgt++++a ++ ++ s ++s+s+ s++ RWV92624.1 72 RSSNKDRHTKVEGRGRRIRVPTLCAARVFQLTRELGHKTDGETVEWLLQQAEPAVIAATGTGTIPAAATftslSTISLRNSGSSVSAPphllaanyfns 170 6789*********************************************************99999555544455555555553333377777776653 PP TCP 89 .....kaaksaakskksqksaasalnlak 112 +s +++s++ ln++ RWV92624.1 171 drsfsF------PSDGQSSSTSVLLNVNP 193 322330......33333333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MAPVDVATLS RMEDESGGYR RPNHALGFSE KKEEDHSCSC SAYPSLAISS TTTGACETFV 60 NAQRKPPPKK IRSSNKDRHT KVEGRGRRIR VPTLCAARVF QLTRELGHKT DGETVEWLLQ 120 QAEPAVIAAT GTGTIPAAAT FTSLSTISLR NSGSSVSAPP HLLAANYFNS DRSFSFPSDG 180 QSSSTSVLLN VNPCSKRCRE PEIHQHQPHP LQNQIAVQGK ASHGQMPRTL WPVTRPNTQD 240 TMGDDGQSTW TLPDQVGSSD MLRVSASSGL HSMNLCTSMA MLPSQQLDLC WGGDGGTPAS 300 LNGHRSLSTT ERMPSPTQQA HRNGKHHGGI RTGDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-29	TCP family protein