PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV92630.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 693aa MW: 76916.2 Da PI: 5.7325

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV92630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	105.2	4.6e-33	463	547	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev+aLi++r+ +e+r+++ lk+plWeevs+ m+ g++rs+k+Ckekwen+nk+++k+ke+ kkr +++s+tcpyf+ql+ RWV92630.1 463 RWPKAEVQALIRVRSGLESRFQEPGLKGPLWEEVSATMATMGYHRSAKRCKEKWENINKYFRKTKERGKKR-PQHSKTCPYFQQLD 547 8******************************************************************98.9*********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MQSGYGGVSE IQKFMVDSCG SSLFSISSAN PTTVGAGAVD TPTTDIHSAA LHPLKYHPLP 60 QPHQPQPQAS PPLPPHFSHF HSVSITQQLF HHPTHQFQLF HPQQQYLEPR QLIPQHQLGL 120 DHEPAPENST SPTRIIPGSS GGGGPSFLTA AMSFKLAVND SSGGGSREGI NDNDAILQGD 180 DGTESRLHHW QREDESSIKE LSWRPLDLDY INRNHKRCKD KEAETSNSKH CRKNKEVDET 240 EDVQVAGGSN YKIFSELEAI YNKPGGGANQ TGSGSALTGD EAPLLHAATV AAPRPPAADE 300 EEEATAKKLS KGSGRRRRKW RQRQLSSVAA FFEDLVKQLM DHQEGLHSQF LDVMERREQQ 360 RISREEAWRK QQVAKSSREA ATRAQERALA SSREAAIISF IEKFTGESLN LPSNLPFQSH 420 MPDADADKED HINTTNNIQI EPYSDTFNNG DPGSSKMSFN TSRWPKAEVQ ALIRVRSGLE 480 SRFQEPGLKG PLWEEVSATM ATMGYHRSAK RCKEKWENIN KYFRKTKERG KKRPQHSKTC 540 PYFQQLDQLY SKSLNTNPIT STSSPNATNV STTAPASGAN EDQRKDNSEL LDAIVVPTDH 600 QSFRFSDMAA LSFDFNSRGD DSDQAGGGGT AAEGLLQPRV SADNNDEEDD DQGGGEQEGE 660 DEEREGDSQR LHQLDQEEED LHDSSLFFQR LRS

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MQSGYGGVSE IQKFMVDSCG SSLFSISSAN PTTVGAGAVD TPTTDIHSAA LHPLKYHPLP  60
QPHQPQPQAS PPLPPHFSHF HSVSITQQLF HHPTHQFQLF HPQQQYLEPR QLIPQHQLGL  120
DHEPAPENST SPTRIIPGSS GGGGPSFLTA AMSFKLAVND SSGGGSREGI NDNDAILQGD  180
DGTESRLHHW QREDESSIKE LSWRPLDLDY INRNHKRCKD KEAETSNSKH CRKNKEVDET  240
EDVQVAGGSN YKIFSELEAI YNKPGGGANQ TGSGSALTGD EAPLLHAATV AAPRPPAADE  300
EEEATAKKLS KGSGRRRRKW RQRQLSSVAA FFEDLVKQLM DHQEGLHSQF LDVMERREQQ  360
RISREEAWRK QQVAKSSREA ATRAQERALA SSREAAIISF IEKFTGESLN LPSNLPFQSH  420
MPDADADKED HINTTNNIQI EPYSDTFNNG DPGSSKMSFN TSRWPKAEVQ ALIRVRSGLE  480
SRFQEPGLKG PLWEEVSATM ATMGYHRSAK RCKEKWENIN KYFRKTKERG KKRPQHSKTC  540
PYFQQLDQLY SKSLNTNPIT STSSPNATNV STTAPASGAN EDQRKDNSEL LDAIVVPTDH  600
QSFRFSDMAA LSFDFNSRGD DSDQAGGGGT AAEGLLQPRV SADNNDEEDD DQGGGEQEGE  660
DEEREGDSQR LHQLDQEEED LHDSSLFFQR LRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	314	322	GRRRRKWRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	1e-51	Trihelix family protein