PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV92904.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family Whirly
Protein Properties Length: 238aa    MW: 26513.4 Da    PI: 10.2969
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV92904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly179.85.3e-56601972139
      Whirly   2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlp 100
                 v+k+kaal+vk+++p++ +lds + +  r+Gg++l++ +a+++rkydWekkq+fals+tev++++ l++ esceffhdp++k+s eG+v+k+l++ Pl+
  RWV92904.1  60 VFKGKAALSVKPILPDIRELDSRSSRTYRNGGVMLTFWPAVGQRKYDWEKKQVFALSPTEVGSFIGLGPAESCEFFHDPSMKSSLEGQVKKSLSISPLS 158
                 9************************************************************************************************** PP

      Whirly 101 dGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                 +  G+f+n+sv n+++k+ne++svPv+kaef+v+r++l+
  RWV92904.1 159 NDNGYFLNISVVNNIQKTNERLSVPVTKAEFTVIRTVLS 197
                 ************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MSFAIKLLIL CKLASKSILG RAANVKDSYW LNTQHGITTS GPDLVTDGSS SIGRFANYTV  60
FKGKAALSVK PILPDIRELD SRSSRTYRNG GVMLTFWPAV GQRKYDWEKK QVFALSPTEV  120
GSFIGLGPAE SCEFFHDPSM KSSLEGQVKK SLSISPLSND NGYFLNISVV NNIQKTNERL  180
SVPVTKAEFT VIRTVLSYVL PHILGWPRAM RSHQPNTEKK MSKQQGELRP DPSFEWGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.13e-71Whirly family protein