PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV92927.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 660aa    MW: 70683.6 Da    PI: 5.7297
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV92927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS242.22.2e-744226362231
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lLl+cAeav++++le+a++lL ++sel++p g++ qR+aayf eA++arl++s+ +ly+ lp+ + +     + ++a+++f+ +sP++kfsh+taNq
  RWV92927.1 422 LTLLLHCAEAVAADNLEEANRLLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGLYAPLPTVPHR----HRLASAFQVFNGISPFVKFSHFTANQ 516
                 579************************************************************999997....788999******************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 aI ea+e+e+rvHiiDfdi+qGlQWp L++ LasRp+gpp++R+Tg+g     s e+le+tg+rL++fAe+lg+pfef + +a+++ +l++e+L v+++
  RWV92927.1 517 AIQEAFEREDRVHIIDFDIMQGLQWPGLFHILASRPGGPPRVRLTGLGY----SMEALEATGKRLSDFAETLGLPFEFVP-IAEKVGNLDPERLGVSRR 610
                 *************************************************....***************************.7***************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklv 231
                 EalaV++    h+l+d ++s ++    +L+l+
  RWV92927.1 611 EALAVHWLQ--HSLYDVTGSDTN----TLWLL 636
                 *******99..888888888777....55555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    
MASTSFLLFP PPAHDSSASS SADHPNSNSS SSSSTTSSSS SLIYTNSTTV PPPQPLLFLP  60
PQSIYYQHQQ EEELLQLIYL QHQQQQQQQQ QEQDKMVKKR LASELDLQSG PSSYGAARLP  120
RRGVSTGSSA SPAFPGDLSG QPSVLFNPSS TQSVDVGQHN AAASVLLPVT TSTTPPAPLP  180
SLPAPPLPAL PSPAVCGFSG LPPFPPEFDR IVLPASGAEG LQLVSSSAGG VGGGGSDDDG  240
AGTAWVDGII RDIISSSAGG EVSIPQIVNS VREIVHPCNP GLAALLELRL RSLISDPSPV  300
PVVPSLPGST ASDLSDKRRR DTRMAPPLPE VGPAPKRANP PPPFPSAAAA TCGRWEEPTS  360
RLQSAQQRPQ PPLQPQTQPQ RSSTPVSSEE ATAATSAAAA AAKEKRDELQ QRKRDEEGLH  420
LLTLLLHCAE AVAADNLEEA NRLLLEISEL STPFGTSAQR VAAYFSEAMS ARLVSSCLGL  480
YAPLPTVPHR HRLASAFQVF NGISPFVKFS HFTANQAIQE AFEREDRVHI IDFDIMQGLQ  540
WPGLFHILAS RPGGPPRVRL TGLGYSMEAL EATGKRLSDF AETLGLPFEF VPIAEKVGNL  600
DPERLGVSRR EALAVHWLQH SLYDVTGSDT NTLWLLQRYT SCSIFLLFWF ASFLLPFFVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-125GRAS family protein