PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV92956.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 252aa MW: 26514.9 Da PI: 7.8341

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV92956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.5	2.7e-44	25	124	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC++dCv+apyfp +qp+kf vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+ +k+ RWV92956.1 25 PCAACKFLRRKCQPDCVFAPYFPPDQPQKFVHVHRVFGASNVTKLLNELQPYQREDAVNSLAYEADMRLRDPVYGCVGVISILQHQLRQLQMDLSCAKS 123 7**********************************************************************************************9998 PP DUF260 100 e 100 e RWV92956.1 124 E 124 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MASSSPQVPV SSATASASPS STSSPCAACK FLRRKCQPDC VFAPYFPPDQ PQKFVHVHRV 60 FGASNVTKLL NELQPYQRED AVNSLAYEAD MRLRDPVYGC VGVISILQHQ LRQLQMDLSC 120 AKSELSKYQS AAAVAAAAAA GTPATSFGAA SPVTAATGHG FINVNHPIGM TGFVYGRDQF 180 FPAAARDPTY NLHMMLRNYD ADLATRLASN GAYDADLAAL NATSAAAFGL FGGQFSKPSA 240 AGGDERPGMG PL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	4e-56	LBD family protein