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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV93404.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | bHLH | ||||||||
| Protein Properties | Length: 117aa MW: 13278.7 Da PI: 4.1683 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 14.3 | 7.5e-05 | 2 | 18 | 39 | 55 |
TCHHHHHHHHHHHHHHH CS
HLH 39 sKaeiLekAveYIksLq 55
+Ka+iL A+eY+k+Lq
RWV93404.1 2 DKASILGDAIEYVKELQ 18
8***************9 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 117 aa Download sequence |
MDKASILGDA IEYVKELQKQ VRDLQDELEK NEEEDQGNDP VPNGMMNRGK QPVSEKDDVD 60 EEEEEEQQQM ELKSLATSKH TCQLVQKGNT NLVVQAEEVR DMLLQTAGGR KEGHLQI |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G16910.1 | 7e-11 | bHLH family protein | ||||




