PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV93691.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 188aa    MW: 20625.6 Da    PI: 8.8643
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV93691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH40.25.6e-13108134127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 +++++C+f+++tG Ck+G+ CkF+H++
  RWV93691.1 108 PGQPECQFYMKTGDCKFGAVCKFHHPR 134
                 5789*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
HVKSQAVAAT RIRGGYPERV GQPDCQVILS CIFGTLHSHH DRSLIYLQGQ LGSSPESQQR  60
IGTAQFYSAP QQGETSAGAQ GKFPSYRQGP VPVGMYAVPR ENIFPERPGQ PECQFYMKTG  120
DCKFGAVCKF HHPRERLVPV PNCVLSPLGL PLRPVSYSSN LPFFHTSVNS LSCLGSVLYL  180
TLLAVPFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16540.17e-41C3H family protein