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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWV93703.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 114aa MW: 13337 Da PI: 10.3014 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 27.8 | 6.1e-09 | 43 | 85 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT +E+e + +a +q G++ +++I +++ + q++++++ +
RWV93703.1 43 AWTRQEEENFFNALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 85
6*****************99.*********.***********976 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 114 aa Download sequence |
MENQTSPTEN LLINNANNTS PSSSSMCTDT QNPVKKPTRQ WAAWTRQEEE NFFNALRQVG 60 KNFEKITCRV QSKNKDQVRH YYYRLVRRMN KLLGPGFCFD AKNSKDTNAA MLRW |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G36960.3 | 4e-48 | MYB_related family protein | ||||




