PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV93796.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 600aa MW: 65816.9 Da PI: 6.7959

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV93796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	8e-13	439	485	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq RWV93796.1 439 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYITELQ 485 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MGSASFWSDE DRRMAVAVLG RQGFDYLNAH QESSSDGHLT AVGGSDADLQ DLVEGQPSTW 60 AYAIFWQISR SESGDLVLGW GDGYCRELGG WEEDCGGCGA RNHPIDAAHQ KMRKRVLERL 120 HALSGGSDDE NYALRLDRIT DVEMYFLASM YFSFPKGENA PGMALASGKH IWISEVGLTS 180 PACANYCVRA FLARSAGFRT IVFLPFDAGV LELGSVDPVP ESFEAVQRIR AIFGHGLDKK 240 AAAAAAVEKT GENNDPVLAS RFGAGGHIAE YRRIFGSDLN LGHAQLNGGV KAEKRRLEMN 300 AKRGDHHQKN PPTDGGTMLQ WNQNHIVNSH QKKFANGAAY VGQVRGVVGG NPPRPANRFR 360 PQEQRQQLKS LPPSGQTDFM ADGPNPAAAG VLVGHLGGLD SELSDLEVPC KEEKPSTTEE 420 RRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAISY 480 ITELQKSLKE MEAEREMYGD SSSLMDYKRK AQCPEIDVQA EQDEVIVRVS CPSETHPVSK 540 VIQFFRESQV NVVDSKVAAS NDSVLHTFVV KSPGTEQLTK EKLITALTHG GGVRMLPSDP

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MGSASFWSDE DRRMAVAVLG RQGFDYLNAH QESSSDGHLT AVGGSDADLQ DLVEGQPSTW  60
AYAIFWQISR SESGDLVLGW GDGYCRELGG WEEDCGGCGA RNHPIDAAHQ KMRKRVLERL  120
HALSGGSDDE NYALRLDRIT DVEMYFLASM YFSFPKGENA PGMALASGKH IWISEVGLTS  180
PACANYCVRA FLARSAGFRT IVFLPFDAGV LELGSVDPVP ESFEAVQRIR AIFGHGLDKK  240
AAAAAAVEKT GENNDPVLAS RFGAGGHIAE YRRIFGSDLN LGHAQLNGGV KAEKRRLEMN  300
AKRGDHHQKN PPTDGGTMLQ WNQNHIVNSH QKKFANGAAY VGQVRGVVGG NPPRPANRFR  360
PQEQRQQLKS LPPSGQTDFM ADGPNPAAAG VLVGHLGGLD SELSDLEVPC KEEKPSTTEE  420
RRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAISY  480
ITELQKSLKE MEAEREMYGD SSSLMDYKRK AQCPEIDVQA EQDEVIVRVS CPSETHPVSK  540
VIQFFRESQV NVVDSKVAAS NDSVLHTFVV KSPGTEQLTK EKLITALTHG GGVRMLPSDP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	421	429	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	7e-66	bHLH family protein