PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV93861.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

AP2

Protein Properties

Length: 297aa MW: 32571.8 Da PI: 4.7333

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV93861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22.7	2.5e-07	149	169	1	21
AP2 1 sgykGVrwdkkrgrWvAeIrd 21 s+y+GV++++++grW+++I+ RWV93861.1 149 SQYRGVTFYRRTGRWESHIWL 169 78*****************97 PP
2	AP2	21.9	4.5e-07	197	228	19	55
AP2 19 Irdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +rd + k+++lg f+ta Aa+a+++a+ k++g RWV93861.1 197 CRD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 228 456......45************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MWNLNDSPDQ MKDAATDAEE DNKGKAPETV STDKDRCCYD NSSSSAVEAD GDCKIFGFTV 60 TGRGRQHVEG SCSADSEPAV ITRQFFPLDE VMEAGDVGSG AGESSLPPAH WVGVQFGQSR 120 QPTATATETA AEASQPAKKN RRGPRSRSSQ YRGVTFYRRT GRWESHIWLA QCPSSFLIFL 180 FPFGDLNQSM CCSSFTCRDC GKQVYLGGFD TAHAAARAYD RAAIKFRGVD ADINFNMEDY 240 EEDIKQVSAA AITCANIRRA APEKDDGCGW ADEQSHEGGV RPCASTPEHW FPERELQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60120.1	1e-33	AP2 family protein