PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV94184.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 177aa    MW: 19937.7 Da    PI: 10.3393
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV94184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.52.3e-30959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien + rqvtfskRr g+lKKA+ELSvLCd+eva+iifss+g+lye+ss
  RWV94184.1  9 KRIENATSRQVTFSKRRSGLLKKAYELSVLCDVEVALIIFSSRGRLYEFSS 59
                79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MVRGKTEMKR IENATSRQVT FSKRRSGLLK KAYELSVLCD VEVALIIFSS RGRLYEFSSS  60
RFHSPALPPL LSLLVSFSYF LASGAVVLWR VHALNLFFIS LACKAPLSVI ENTREKIPAA  120
PYWKKILRYC IPIFCNLGSI ITCIGSVTDI VVHLIQESSL VKENALLREK VRLLGFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.13e-33MIKC_MADS family protein