PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94229.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 204aa MW: 23154.5 Da PI: 10.1288

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19	3.7e-06	76	98	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H RWV94229.1 76 FVCEVCNKGFQREQNLQLHRRGH 98 89*******************88 PP
2	zf-C2H2	16.7	2e-05	152	174	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+Lk H + + RWV94229.1 152 WKCDKCSKRYAVQSDLKAHSKIC 174 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MASASSSSPF FGVREDEHHT QVMQQQSSST PPPQAAAPVK KKRSLPGNPC KYLTCSDPDA 60 EVIALSPRTL LATNRFVCEV CNKGFQREQN LQLHRRGHNL PWKLRQKTTK EVRRRVYLCP 120 EPTCIHHDPS RPLGDLTGVK KHFCRKHGEK KWKCDKCSKR YAVQSDLKAH SKICGTREYR 180 CDCGTLFSRL VSGNGSDQIH LSQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	2e-90	C2H2 family protein