PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94259.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 317aa MW: 34667.7 Da PI: 8.489

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	5	26	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C Cg++Fs+ + L H+r+H RWV94259.1 5 RCRLCGRRFSNGHALGGHMRSH 26 6********************9 PP
2	zf-C2H2	14.5	0.00011	242	264	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C ++Fs+ L H r+H RWV94259.1 242 FECPYCYRVFSSGQALGGHKRSH 264 89******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MERPRCRLCG RRFSNGHALG GHMRSHRNSA ARPVMAQQAL PSPSASSSSF SVAAEGRPAM 60 GAYGFRKNPK RSFRLVDPEF SSSVVAGGSS TVVHEGESDA ESSFRRRLSR PRRQVDAVAD 120 AKPVSSISDA PTEEDVARCL MLLSRNAWSK SEAEGQRSNG LDEANEAEEE EIYSDQVEEE 180 KGPPLAARSR RKRTRYQCST CGKFLRSYQA LGGHRASHKR VEVERIPTVA DADAPDREPK 240 LFECPYCYRV FSSGQALGGH KRSHLSSAIT APLHRPLPAL SPVVLEGSFI DLNLPATPEE 300 EAELSTLSVA TEFASKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	1e-38	C2H2 family protein