PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94421.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 413aa MW: 46168 Da PI: 8.4971

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.6e-05	22	42	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H RWV94421.1 22 CEICGKGFQRDQNLQLHRRGH 42 *******************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
DPEAEVIALS PKTLLATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLRQ RTSKEPRKRV 60 YVCPEKSCVH HHPSRALGDL TGIKKHFCRK HGEKKWKCDK CSKRYAVQSD CKAHSKTCGT 120 REYRCDCGAV FSRRDSFITH RAFCDALAEE TARVAASNMS RLTSICNGNF SFTSDLMRSN 180 IANNFSGAIS NTTMTEAEMV GHARRELSLW MGEGDHTENL SKRNDLLNPH QSKPLSTDDL 240 FGNPFASRYP NQLSSIYSDE LTSNALPTSR MKETENPQSL LLSVPSRSST QHQHQHQQMA 300 MTPDVSATAL LQKAALIGLN ASCATPLSCF ETKSQECNFR FLSNSSLLDV NHSSLATLSG 360 NTMDNSTLPN PLTRVYPTRH LMIQKDDEPG GETRDFLGVD APTICASSWN GWV

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

DPEAEVIALS PKTLLATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLRQ RTSKEPRKRV  60
YVCPEKSCVH HHPSRALGDL TGIKKHFCRK HGEKKWKCDK CSKRYAVQSD CKAHSKTCGT  120
REYRCDCGAV FSRRDSFITH RAFCDALAEE TARVAASNMS RLTSICNGNF SFTSDLMRSN  180
IANNFSGAIS NTTMTEAEMV GHARRELSLW MGEGDHTENL SKRNDLLNPH QSKPLSTDDL  240
FGNPFASRYP NQLSSIYSDE LTSNALPTSR MKETENPQSL LLSVPSRSST QHQHQHQQMA  300
MTPDVSATAL LQKAALIGLN ASCATPLSCF ETKSQECNFR FLSNSSLLDV NHSSLATLSG  360
NTMDNSTLPN PLTRVYPTRH LMIQKDDEPG GETRDFLGVD APTICASSWN GWV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-120	C2H2 family protein