PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94586.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 238aa MW: 26527 Da PI: 8.1628

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.6	8.1e-10	14	51	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv ++k +G g + R++k+c++rw +yl RWV94586.1 14 KGAWTKEEDEKLVSYIKAHGEG----------LLRCGKSCRLRWINYL 51 79****************99..........689*********97 PP
2	Myb_DNA-binding	54.5	2.7e-17	57	106	1	47
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel+++++ lG++ +W++Ia +++ gRt++++k++w+++ RWV94586.1 57 RGNFTEEEDELIIKLHGVLGNKyvisQWSLIAGRLP-GRTDNEIKNYWNTH 106 89********************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDEKLVSYIK AHGEGLLRCG KSCRLRWINY LRPDLKRGNF 60 TEEEDELIIK LHGVLGNKYV ISQWSLIAGR LPGRTDNEIK NYWNTHIKRK LLGRGIDPQT 120 HRQILQLPET AMLQDMAAAV QAPAEYSSSD DANCGGASQD DVRYIDLNLD LSISLPHHSP 180 KRAHPSQALS SAATSGYSPS PICLCRHLGF QGSEACSCRS TTHPNVLRVI RPLEEAQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	1e-76	MYB family protein