PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWV94673.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 145aa MW: 15687 Da PI: 8.5005

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWV94673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	47.9	3.9e-15	14	49	1	36
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhkl 36 +CaaCk+lrr+Ca dCv+ap+fpa++p+kfanvh++ RWV94673.1 14 PCAACKLLRRRCAWDCVFAPHFPADEPQKFANVHRV 49 7*********************************98 PP
2	DUF260	42	2.7e-13	50	89	61	100
DUF260 61 lvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 lvyeA+ar+rdPvyG+vgvi++l+ q++ l+a+la+++++ RWV94673.1 50 LVYEANARVRDPVYGCVGVISSLHCQVQALEAQLAMAQAQ 89 89**********************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MKEAGRQQHG TASPCAACKL LRRRCAWDCV FAPHFPADEP QKFANVHRVL VYEANARVRD 60 PVYGCVGVIS SLHCQVQALE AQLAMAQAQM VRLRMLAHLD LGRSPTGTGS TTTGSSSMCP 120 PSPIYTPGGH GDAAQTPMLS FSYER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	1e-35	LBD family protein