PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWV94788.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family GRAS
Protein Properties Length: 465aa    MW: 50536.4 Da    PI: 6.2718
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWV94788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS366.43.9e-112904483374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                  lLl+cAeav++++l++a+ lL ++selasp g++ +R+aayf+ AL+ar+++s  + y+ l++ +++   + +  +a++ ++ +sP++kfsh+taNqa
  RWV94788.1  90 GLLLRCAEAVAADQLAEARDLLPEISELASPFGSSPERVAAYFADALRARIVSSFLGAYSPLAAVAAT---QRRISHAFNSYNAISPLVKFSHFTANQA 185
                 58************************************************************999998...7888899999****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp.. 198
                 I ea++ge++vH++D+di+qGlQWp L++ LasRp++  slR+Tgvgs    s e le+tg+rL++fAe+lg+pfef++l  k  +  ++  L   +  
  RWV94788.1 186 IFEALDGEDCVHVVDLDIMQGLQWPGLFHILASRPAKLRSLRLTGVGS----SIELLEATGRRLSDFAEALGLPFEFHPLEGKIGHLADPAPLLAPRhp 280
                 ************************************************....9**************************98888888899999666567 PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +Ea++V++++  h l+d ++s +     +++l++ l+Pk++++veq+++h ++ Fl rf+eal+yysalfd+l  +++++seer+ vEr+ll+ ei+n+
  RWV94788.1 281 REAIVVHWMH--HCLYDVTGSDAG----TVRLLQALRPKLITIVEQDLSH-AGGFLGRFVEALHYYSALFDALGDGAGADSEERHAVERQLLAAEIKNI 372
                 *********9..888888888888....**********************.889*******************99*9********************** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 va  g +r+ + + +e+W e l++aGF+ v+l  + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaW+
  RWV94788.1 373 VAVGGPKRTGEVK-VERWGEELSKAGFRRVSLAGSPAAQANLLLGMFPWKGYTLVEEHGCLKLGWKDLSLLTASAWQ 448
                 *******998887.9*************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MLRSVQRRPS IKANAMRPKR PDRDPSSSSA GGSTAAAGHT TTGCGDVEDE DRARKKRNQL  60
QPEMEIVVAE EEDVEAEGRG AEWRGLRLLG LLLRCAEAVA ADQLAEARDL LPEISELASP  120
FGSSPERVAA YFADALRARI VSSFLGAYSP LAAVAATQRR ISHAFNSYNA ISPLVKFSHF  180
TANQAIFEAL DGEDCVHVVD LDIMQGLQWP GLFHILASRP AKLRSLRLTG VGSSIELLEA  240
TGRRLSDFAE ALGLPFEFHP LEGKIGHLAD PAPLLAPRHP REAIVVHWMH HCLYDVTGSD  300
AGTVRLLQAL RPKLITIVEQ DLSHAGGFLG RFVEALHYYS ALFDALGDGA GADSEERHAV  360
ERQLLAAEIK NIVAVGGPKR TGEVKVERWG EELSKAGFRR VSLAGSPAAQ ANLLLGMFPW  420
KGYTLVEEHG CLKLGWKDLS LLTASAWQPA ADDHDVEADR MPHIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-151GRAS family protein